1. Nat Commun. 2020 May 4;11(1):2200. doi: 10.1038/s41467-020-15966-7. Intracellular Staphylococcus aureus persisters upon antibiotic exposure. Peyrusson F(1), Varet H(2), Nguyen TK(1), Legendre R(2), Sismeiro O(3), Coppée JY(3), Wolz C(4), Tenson T(5), Van Bambeke F(6). Author information: (1)Pharmacologie cellulaire et moléculaire, Louvain Drug Research Institute, Université catholique de Louvain (UCLouvain), Brussels, Belgium. (2)Hub de Bioinformatique et Biostatistique - Département Biologie Computationnelle, Institut Pasteur, USR 3756 CNRS, Paris, France. (3)Institut Pasteur, Plate-forme Transcriptome et Epigenome, Biomics, Centre de Ressources et Recherches Technologiques (C2RT), Paris, France. (4)Institut für Medizinische Mikrobiologie und Hygiene, Tübingen, Germany. (5)Institute of Technology, University of Tartu, Tartu, Estonia. (6)Pharmacologie cellulaire et moléculaire, Louvain Drug Research Institute, Université catholique de Louvain (UCLouvain), Brussels, Belgium. francoise.vanbambeke@uclouvain.be. Bacterial persister cells are phenotypic variants that exhibit a transient non-growing state and antibiotic tolerance. Here, we provide in vitro evidence of Staphylococcus aureus persisters within infected host cells. We show that the bacteria surviving antibiotic treatment within host cells are persisters, displaying biphasic killing and reaching a uniformly non-responsive, non-dividing state when followed at the single-cell level. This phenotype is stable but reversible upon antibiotic removal. Intracellular S. aureus persisters remain metabolically active but display an altered transcriptomic profile consistent with activation of stress responses, including the stringent response as well as cell wall stress, SOS and heat shock responses. These changes are associated with multidrug tolerance after exposure to a single antibiotic. We hypothesize that intracellular S. aureus persisters may constitute a reservoir for relapsing infection and could contribute to therapeutic failures. DOI: 10.1038/s41467-020-15966-7 PMCID: PMC7198484 PMID: 32366839 [Indexed for MEDLINE] Conflict of interest statement: The authors declare no competing interests.